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Machine Z and Software Z

Posted: Sun Oct 08, 2017 8:39 am
by Xray965
Been trying to figure this part out.

When setting up a new machine for the first time, do I need to setup Z on the machine first, or do I just set everything on the software ?

Since what I have today is first layer height at 1% and the machine set a 0.865.

Feels like am doing something wrong ?

In other words the software controls everything on the machine I just set it up on the software other than the calibration when first booting the machine.

Prusa i3 Mk2s

Thanks