nozzle temp, fan speed and print speed - match those and you'll get same quality
pay attention to how makerbot does the cooling ... if you are printing only one of these crews s3d can only slow down printing and turn on the cooler nothing else, iirc makerbot's sw will move the head and run around letting each layer cool.
easiest way, when possible is to print more then one at a time

.. this gives the others time to cool down
gcodestat integrates with Simplify3D and allow you to
Calculate print time accurately (acceleration, max speed, junction deviation all taken into consideration)
Embed M117 codes into G-Code
Upload your G-Code directly to Octoprint
open source and unlicence