Well you've got a difficult choice here, spend 6 hours printing with Makerware and get accurate estimates, or print in 2 and a half hours in S3D and do a bit of math (multiply by 1.3-1.5) to get the right print times.
I reduced the quantity of supports, I set 62 as the default overhang angle, then deleted everything in the tube past curves since they're impossible to remove anyways. Interior of the tubes actually came out cleaner. Filament usage also down from 12m to 9m. Cleanup was also quicker and easier.
You can take a glance at the .factory file, maybe use it as the basis for future prints like this.
https://dl.dropboxusercontent.com/u/703 ... _2.factory